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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
64
accessible chromatin
49
gene expression
48
target gene predictions
33
differential activity
30
candidate regulatory elements
22
chromatin state
11
eQTL
8
binding sites
7
histone modifications
7
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
38
February, 2021
34
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
10
March, 2020
8
August, 2021
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
5
June, 2020
4
August, 2017
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
169
bed bed3+
77
tsv
55
bigWig
17
bed bed9
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
288
Homo sapiens
Biosample type
144
primary cell
106
tissue
35
cell line
3
in vitro differentiated cells
Organ
934
epithelium
632
kidney
444
connective tissue
429
brain
369
musculature of body
310
lung
286
intestine
267
pancreas
248
vasculature
241
heart
232
limb
218
bodily fluid
215
embryo
207
blood
201
skin of body
190
blood vessel
172
large intestine
152
liver
145
extraembryonic component
118
stomach
107
eye
88
bone element
87
mammary gland
83
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
placenta
67
artery
64
penis
62
lymph node
61
ureter
48
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
testis
22
ovary
22
thyroid gland
21
lymphatic vessel
21
nerve
21
vein
18
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
248
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
200
hg19
59
GRCh38
month_released!
May, 2020
January, 2022
BIOSAMPLE
TYPE
288 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
endothelial cell of umbilical vein
1
4
6
5
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
+ See 13 more…
tissue
islet of Langerhans
4
11
1
3
10
2
1
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 7 more…
cell line
EndoC_BH1
8
8
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
vein endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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