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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
gene expression
212
accessible chromatin
133
target gene predictions
107
candidate regulatory elements
87
differential activity
60
chromatin state
42
variant allelic effects
34
binding sites
28
histone modifications
18
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
202
February, 2021
167
September, 2022
135
September, 2023
125
November, 2021
66
February, 2024
47
March, 2023
41
May, 2021
31
August, 2021
26
June, 2020
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
13
March, 2020
12
February, 2023
10
February, 2020
7
August, 2018
6
October, 2019
5
April, 2020
5
August, 2017
5
October, 2022
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
564
bed bed3+
322
tsv
174
bigWig
78
txt
54
bed bed9
15
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
984
Homo sapiens
Biosample type
738
primary cell
168
tissue
52
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
695
AMP
135
KPMP
125
ENCODE
22
T1D
5
LungMap
2
community
Genome assembly (visualization)
633
hg19
235
GRCh38
organ_slims!
blood vessel
spinal cord
BIOSAMPLE
TYPE
984 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 137 more…
tissue
islet of Langerhans
11
6
1
3
1
2
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
endocrine pancreas
4
7
4
+ See 20 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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