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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
157
candidate regulatory elements
131
target gene predictions
88
accessible chromatin
87
chromatin state
51
gene expression
33
differential activity
18
eQTL
15
histone modifications
14
variant allelic effects
12
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
241
September, 2022
113
February, 2021
47
March, 2023
40
May, 2021
38
November, 2021
31
February, 2024
20
January, 2021
15
June, 2020
12
March, 2020
8
August, 2021
7
August, 2017
7
August, 2018
7
January, 2022
7
May, 2020
6
October, 2019
4
January, 2020
3
March, 2024
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
425
bed bed3+
79
bed bed9
79
tsv
69
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
615
Homo sapiens
Biosample type
394
tissue
150
primary cell
68
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
555
AMP
38
ENCODE
20
T1D
2
community
Genome assembly (visualization)
518
hg19
152
GRCh38
organ_slims!
testis
BIOSAMPLE
TYPE
615 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
thymus
20
14
1
11
1
1
islet of Langerhans
1
6
3
11
13
1
1
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
+ See 27 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 20 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
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