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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
candidate regulatory elements
252
gene expression
163
target gene predictions
129
chromatin state
128
accessible chromatin
89
differential activity
30
binding sites
28
variant allelic effects
25
histone modifications
22
eQTL
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
371
September, 2022
287
February, 2021
140
September, 2023
47
March, 2023
38
May, 2021
36
August, 2021
31
November, 2021
27
February, 2024
27
June, 2020
25
May, 2020
20
January, 2021
18
January, 2020
12
March, 2020
11
February, 2020
8
January, 2022
7
August, 2018
6
October, 2019
6
October, 2022
4
August, 2017
4
March, 2024
2
April, 2019
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
633
bed bed3+
329
tsv
124
bed bed9
98
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1133
Homo sapiens
Biosample type
535
primary cell
440
tissue
145
cell line
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
940
AMP
140
KPMP
31
ENCODE
20
T1D
2
community
Genome assembly (visualization)
772
hg19
213
GRCh38
organ_slims!
urinary bladder
BIOSAMPLE
TYPE
1133 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
foreskin keratinocyte
11
4
4
pancreatic ductal cell
3
3
6
3
1
1
2
pancreatic beta cell
3
3
8
3
1
+ See 93 more…
tissue
kidney
29
7
14
16
10
1
1
2
1
islet of Langerhans
11
1
3
6
2
1
1
13
2
2
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 33 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 33 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
renal cell carcinoma
1
+ See 1 more…
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