Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
target gene predictions
95
candidate regulatory elements
80
accessible chromatin
57
binding sites
52
chromatin state
49
gene expression
35
histone modifications
33
differential activity
17
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
143
September, 2022
129
February, 2021
53
February, 2024
47
March, 2023
38
May, 2021
21
October, 2022
20
January, 2021
19
June, 2020
18
November, 2021
10
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
394
bed bed3+
77
tsv
57
bigWig
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
548
Homo sapiens
Biosample type
244
cell line
176
primary cell
119
tissue
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
508
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
456
hg19
122
GRCh38
organ_slims!
esophagus
BIOSAMPLE
TYPE
548 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
7
1
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
GM19240
2
1
1
2
1
1
+ See 33 more…
primary cell
foreskin keratinocyte
4
11
4
pancreatic ductal cell
3
6
1
3
2
3
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
foreskin fibroblast
2
6
1
4
1
2
+ See 17 more…
tissue
islet of Langerhans
1
6
2
3
11
1
13
1
2
2
2
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
1
3
1
1
1
endocrine pancreas
4
7
4
blood
2
+ See 9 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
pancreatic ductal cell
3
See all biosamples
Download