Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
accessible chromatin
60
target gene predictions
49
candidate regulatory elements
13
binding sites
12
histone modifications
11
variant allelic effects
4
chromatin state
1
eQTL
1
sQTL
Date released
59
September, 2022
56
February, 2021
22
January, 2021
20
February, 2024
19
November, 2021
15
May, 2021
9
June, 2020
7
May, 2020
6
October, 2019
4
March, 2020
3
August, 2017
3
January, 2020
2
November, 2019
1
April, 2019
1
August, 2021
1
June, 2021
1
October, 2022
Available data
229
bed bed3+
80
tsv
67
bigWig
27
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
229
Homo sapiens
Biosample type
84
tissue
82
primary cell
63
cell line
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
188
AMP
22
T1D
19
ENCODE
Genome assembly (visualization)
229
hg19
49
GRCh38
BIOSAMPLE
TYPE
229 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
sQTL
tissue
pancreas
5
5
5
1
1
1
1
islet of Langerhans
6
1
2
1
1
3
1
1
body of pancreas
5
8
1
endocrine pancreas
4
7
femur
1
2
+ See 17 more…
primary cell
pancreatic beta cell
8
3
1
pancreatic ductal cell
5
3
1
2
1
pancreatic alpha cell
7
3
1
pancreatic delta cell
5
4
1
pancreatic acinar cell
5
3
1
+ See 11 more…
cell line
EndoC_BH1
8
1
1
MG63
1
1
2
1
1
OCI-LY1
1
2
1
1
SJSA1
1
1
2
1
L1-S8
1
1
2
+ See 12 more…
See all biosamples
Download