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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
208
candidate regulatory elements
135
target gene predictions
130
accessible chromatin
109
chromatin state
89
differential activity
27
variant allelic effects
20
binding sites
19
eQTL
18
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
311
September, 2022
255
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
26
May, 2020
24
June, 2020
22
January, 2021
22
November, 2021
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
3
October, 2022
2
April, 2019
2
March, 2024
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
1
May, 2022
Available data
538
bed bed3+
331
tsv
104
bed bed9
103
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
1018
Homo sapiens
Biosample type
449
primary cell
437
tissue
128
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
832
AMP
140
KPMP
22
ENCODE
22
T1D
2
community
Genome assembly (visualization)
658
hg19
189
GRCh38
BIOSAMPLE
TYPE
1018 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
3
6
3
1
1
2
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 86 more…
tissue
kidney
7
29
14
10
16
1
1
1
2
islet of Langerhans
11
1
6
3
1
2
13
1
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 38 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 24 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
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