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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
208
candidate regulatory elements
135
target gene predictions
130
accessible chromatin
109
chromatin state
89
differential activity
27
variant allelic effects
binding sites
19
eQTL
18
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
311
September, 2022
239
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
26
May, 2020
24
June, 2020
22
January, 2021
22
November, 2021
18
January, 2020
11
February, 2020
11
March, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
1
May, 2022
Available data
518
bed bed3+
331
tsv
104
bed bed9
103
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
998
Homo sapiens
Biosample type
445
primary cell
430
tissue
119
cell line
4
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
812
AMP
140
KPMP
22
ENCODE
22
T1D
2
community
Genome assembly (visualization)
638
hg19
189
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
998 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic beta cell
3
3
8
3
1
pancreatic ductal cell
3
3
6
3
1
2
pancreatic alpha cell
3
3
7
3
1
+ See 86 more…
tissue
kidney
7
29
14
10
16
1
1
2
islet of Langerhans
11
1
6
3
1
13
1
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 37 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
1
MG63
2
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 23 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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