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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
208
candidate regulatory elements
135
target gene predictions
109
chromatin state
106
accessible chromatin
89
differential activity
27
variant allelic effects
20
binding sites
19
eQTL
18
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
311
September, 2022
255
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
26
May, 2020
June, 2020
22
January, 2021
22
November, 2021
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
3
October, 2022
2
April, 2019
2
March, 2024
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
1
May, 2022
Available data
515
bed bed3+
331
tsv
104
bed bed9
103
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
994
Homo sapiens
Biosample type
443
primary cell
429
tissue
119
cell line
3
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
808
AMP
140
KPMP
22
ENCODE
22
T1D
2
community
Genome assembly (visualization)
635
hg19
189
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
994 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
1
pancreatic beta cell
3
3
8
3
1
pancreatic ductal cell
3
3
5
3
1
1
2
pancreatic alpha cell
3
3
7
3
1
+ See 86 more…
tissue
kidney
7
29
14
16
9
1
1
1
2
islet of Langerhans
11
1
3
5
1
2
13
1
2
2
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
1
1
+ See 36 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
2
1
MG63
2
1
1
1
1
OCI-LY1
2
1
1
1
1
OCI-LY3
2
1
1
1
+ See 24 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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