Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
77
target gene predictions
76
candidate regulatory elements
66
gene expression
46
chromatin state
35
differential activity
29
eQTL
15
binding sites
14
variant allelic effects
13
histone modifications
11
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
122
September, 2022
94
February, 2021
47
March, 2023
36
May, 2021
27
February, 2024
22
January, 2021
19
November, 2021
17
March, 2020
14
August, 2021
11
June, 2020
10
May, 2020
8
January, 2020
8
January, 2022
7
August, 2018
7
February, 2020
6
October, 2019
5
August, 2017
2
January, 2018
2
November, 2019
2
September, 2018
1
April, 2019
1
February, 2023
1
June, 2021
1
March, 2024
1
May, 2022
1
November, 2022
1
October, 2022
Available data
291
bed bed3+
103
tsv
72
bigWig
39
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
csv
3
xls
1
bed bed9+
Organism
474
Homo sapiens
Biosample type
231
tissue
145
primary cell
94
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
431
AMP
22
T1D
19
ENCODE
2
community
Genome assembly (visualization)
357
hg19
112
GRCh38
2
hg18
BIOSAMPLE
TYPE
474 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
adipose tissue
2
8
7
3
6
4
1
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
subcutaneous adipose tissue
2
2
5
1
1
6
1
3
+ See 28 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 20 more…
cell line
EndoC_BH1
8
1
8
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 15 more…
in vitro differentiated cells
pancreatic ductal cell
3
white adipose cell
1
See all biosamples
Download