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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
accessible chromatin
121
target gene predictions
104
candidate regulatory elements
93
gene expression
65
chromatin state
41
differential activity
36
binding sites
34
eQTL
31
histone modifications
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
164
September, 2022
139
February, 2021
68
November, 2021
47
March, 2023
47
May, 2021
28
February, 2024
24
June, 2020
20
January, 2021
19
August, 2021
18
March, 2020
17
September, 2023
14
January, 2020
12
October, 2022
11
February, 2020
10
August, 2017
10
January, 2022
8
October, 2019
7
August, 2018
7
November, 2022
3
April, 2020
3
May, 2020
3
May, 2022
3
November, 2020
2
February, 2023
2
January, 2018
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
Available data
458
bed bed3+
130
tsv
104
bigWig
54
bed bed9
10
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
693
Homo sapiens
Biosample type
376
primary cell
201
tissue
64
cell line
51
in vitro differentiated cells
1
stem cell
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
581
AMP
68
ENCODE
20
T1D
15
KPMP
4
ITG
3
LungMap
2
community
Genome assembly (visualization)
542
hg19
181
GRCh38
2
hg18
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
693 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
16
4
1
2
pericyte cell
10
10
1
1
pancreatic ductal cell
6
3
3
3
1
2
osteoblast
5
2
2
2
1
3
2
pancreatic beta cell
8
3
3
3
+ See 56 more…
tissue
islet of Langerhans
6
1
11
3
2
13
1
2
2
2
adipose tissue
2
8
7
3
6
1
4
body of pancreas
5
8
2
4
1
3
pancreas
5
5
5
3
1
1
1
subcutaneous adipose tissue
2
2
5
1
1
6
3
+ See 15 more…
cell line
EndoC_BH1
8
1
8
3
GM23248
1
1
2
1
1
1
Panc1
2
2
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
+ See 13 more…
in vitro differentiated cells
adipocyte
4
6
4
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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