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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
149
accessible chromatin
121
target gene predictions
104
candidate regulatory elements
65
chromatin state
36
binding sites
31
eQTL
31
histone modifications
27
variant allelic effects
16
gene expression
2
Fine-mapped variants
2
caQTL
2
differential activity
2
pQTL
2
sQTL
Date released
164
September, 2022
112
February, 2021
68
November, 2021
36
February, 2024
30
May, 2021
24
June, 2020
20
January, 2021
18
August, 2021
16
May, 2020
12
January, 2020
12
October, 2022
10
August, 2017
10
January, 2022
8
October, 2019
7
August, 2018
7
March, 2020
7
November, 2022
6
March, 2023
5
February, 2020
3
April, 2020
3
May, 2022
2
November, 2019
2
November, 2020
2
September, 2018
2
September, 2023
1
April, 2019
1
February, 2023
1
June, 2021
Available data
484
bed bed3+
tsv
108
bigWig
54
bed bed9
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
590
Homo sapiens
Biosample type
321
primary cell
164
tissue
56
cell line
48
in vitro differentiated cells
1
stem cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
493
AMP
68
ENCODE
20
T1D
4
ITG
3
LungMap
2
community
Genome assembly (visualization)
556
hg19
169
GRCh38
2
hg18
files.file_type!
tsv
BIOSAMPLE
TYPE
590 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
eQTL
histone modifications
variant allelic effects
gene expression
Fine-mapped variants
caQTL
differential activity
pQTL
sQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
1
fibroblast of lung
4
6
4
2
foreskin fibroblast
1
2
6
1
4
2
osteoblast
5
2
2
1
3
2
+ See 46 more…
tissue
islet of Langerhans
6
1
3
2
13
1
1
2
2
2
adipose tissue
2
8
7
6
1
4
1
pancreas
5
5
5
3
1
1
1
1
body of pancreas
5
8
4
1
endocrine pancreas
4
7
4
+ See 15 more…
cell line
EndoC_BH1
8
1
1
2
GM23248
1
1
2
1
1
1
Panc1
2
2
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
+ See 13 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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