Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
159
accessible chromatin
128
target gene predictions
112
candidate regulatory elements
101
gene expression
72
chromatin state
43
differential activity
40
binding sites
39
eQTL
35
histone modifications
31
variant allelic effects
17
Fine-mapped variants
4
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
182
September, 2022
152
February, 2021
68
November, 2021
49
May, 2021
47
March, 2023
41
February, 2024
26
June, 2020
24
March, 2020
22
September, 2023
21
May, 2020
20
January, 2021
19
August, 2021
18
January, 2020
15
February, 2020
13
January, 2022
12
October, 2022
10
August, 2017
8
October, 2019
7
August, 2018
7
November, 2022
5
February, 2023
4
November, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2018
2
September, 2018
1
April, 2019
1
June, 2021
1
May, 2019
Available data
523
bed bed3+
146
tsv
117
bigWig
61
bed bed9
14
bigBed narrowPeak
7
txt
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
787
Homo sapiens
Biosample type
415
primary cell
249
tissue
69
cell line
53
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
670
AMP
68
ENCODE
20
KPMP
20
T1D
4
ITG
3
LungMap
2
community
Genome assembly (visualization)
620
hg19
208
GRCh38
2
hg18
BIOSAMPLE
TYPE
787 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
1
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
osteoblast
5
2
2
2
1
3
2
+ See 61 more…
tissue
islet of Langerhans
6
1
11
3
2
13
1
1
2
2
2
adipose tissue
2
8
7
3
6
1
4
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
+ See 20 more…
cell line
EndoC_BH1
8
1
8
3
1
GM23248
1
1
2
1
1
1
Panc1
2
2
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
+ See 14 more…
in vitro differentiated cells
adipocyte
4
6
4
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
pancreatic ductal cell
3
fibroblast
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download