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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
target gene predictions
81
candidate regulatory elements
77
accessible chromatin
58
gene expression
45
chromatin state
33
differential activity
18
binding sites
17
histone modifications
15
eQTL
11
variant allelic effects
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
125
September, 2022
84
February, 2021
76
February, 2024
45
March, 2023
40
May, 2021
20
January, 2021
20
November, 2021
16
August, 2021
14
June, 2020
7
August, 2018
7
March, 2020
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
337
bed bed3+
83
tsv
59
bigWig
40
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
487
Homo sapiens
Biosample type
161
cell line
148
primary cell
144
tissue
33
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
445
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
388
hg19
138
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
487 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
sQTL
variant to gene
cell line
H1-hESC
39
1
1
8
1
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 16 more…
tissue
islet of Langerhans
1
6
11
3
2
1
13
1
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
5
8
2
4
1
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 12 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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