Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
41
accessible chromatin
30
differential activity
29
target gene predictions
24
gene expression
7
candidate regulatory elements
7
variant allelic effects
4
chromatin state
histone modifications
2
binding sites
Date released
39
March, 2023
20
January, 2021
20
November, 2021
16
September, 2022
13
May, 2021
12
February, 2024
8
February, 2021
7
August, 2018
5
October, 2019
3
June, 2020
1
June, 2021
Available data
84
bed bed3+
47
tsv
42
bigWig
14
bigBed narrowPeak
4
bed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
144
Homo sapiens
Biosample type
155
cell line
144
primary cell
144
tissue
31
in vitro differentiated cells
1
stem cell
Organ
802
epithelium
309
kidney
271
connective tissue
166
vasculature
123
pancreas
111
blood vessel
96
skin of body
58
liver
47
musculature of body
45
mammary gland
39
penis
38
extraembryonic component
35
brain
34
lung
30
heart
26
artery
22
eye
22
intestine
21
embryo
20
vein
17
lymphatic vessel
15
bronchus
11
adrenal gland
11
bone element
11
bone marrow
11
stomach
10
esophagus
10
prostate gland
9
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
4
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
104
AMP
20
ENCODE
20
T1D
Genome assembly (visualization)
90
hg19
29
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
144 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
target gene predictions
gene expression
candidate regulatory elements
variant allelic effects
chromatin state
binding sites
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
trophoblast cell
1
5
7
4
pancreatic acinar cell
6
3
3
3
1
+ See 16 more…
See all biosamples
Download