Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
151
target gene predictions
118
candidate regulatory elements
80
accessible chromatin
65
chromatin state
57
gene expression
33
differential activity
18
binding sites
17
histone modifications
15
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
182
September, 2022
102
February, 2021
76
February, 2024
47
March, 2023
41
May, 2021
24
November, 2021
20
January, 2021
16
August, 2021
15
June, 2020
11
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
5
January, 2022
4
January, 2020
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
401
bed bed3+
84
tsv
61
bigWig
59
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
574
Homo sapiens
Biosample type
227
tissue
161
cell line
152
primary cell
33
in vitro differentiated cells
1
stem cell
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
528
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
473
hg19
164
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
574 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
17
29
1
15
1
islet of Langerhans
1
6
3
11
2
1
13
1
2
2
2
body of pancreas
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
chorionic villus
4
8
4
+ See 15 more…
cell line
H1-hESC
39
1
1
1
8
2
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 18 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
Download