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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
gene expression
228
accessible chromatin
142
target gene predictions
124
candidate regulatory elements
differential activity
70
chromatin state
46
binding sites
45
variant allelic effects
31
histone modifications
18
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
219
February, 2021
191
September, 2022
128
November, 2021
93
September, 2023
80
February, 2024
42
May, 2021
31
August, 2021
28
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
16
March, 2023
15
November, 2022
14
March, 2020
11
February, 2020
11
February, 2023
7
April, 2020
7
August, 2018
6
August, 2017
6
October, 2019
6
October, 2022
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
623
bed bed3+
254
tsv
188
bigWig
78
txt
63
bed bed9
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
985
Homo sapiens
Biosample type
740
primary cell
168
tissue
51
cell line
26
in vitro differentiated cells
Organ
857
epithelium
596
kidney
466
brain
444
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
735
AMP
128
ENCODE
93
KPMP
22
T1D
7
LungMap
Genome assembly (visualization)
701
hg19
265
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
985 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 151 more…
tissue
islet of Langerhans
11
6
1
3
2
1
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
endocrine pancreas
4
7
4
+ See 20 more…
cell line
EndoC_BH1
8
8
1
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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