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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
54
target gene predictions
50
gene expression
41
candidate regulatory elements
33
differential activity
24
chromatin state
18
eQTL
13
variant allelic effects
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
65
September, 2022
47
March, 2023
35
February, 2021
33
May, 2021
27
February, 2024
22
November, 2021
20
January, 2021
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
186
bed bed3+
78
tsv
59
bigWig
20
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
316
Homo sapiens
Biosample type
147
tissue
133
primary cell
33
cell line
3
in vitro differentiated cells
Organ
921
epithelium
646
kidney
433
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
272
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
220
hg19
75
GRCh38
annotation_type!
histone modifications
BIOSAMPLE
TYPE
316 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
esophagus muscularis mucosa
1
2
5
2
1
+ See 12 more…
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 14 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic ductal cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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