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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
80
target gene predictions
74
accessible chromatin
50
chromatin state
48
gene expression
33
differential activity
16
eQTL
11
histone modifications
variant allelic effects
8
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
143
September, 2022
63
February, 2021
47
March, 2023
36
May, 2021
21
November, 2021
20
January, 2021
19
February, 2024
10
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
260
bed bed3+
76
tsv
56
bigWig
46
bed bed9
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
412
Homo sapiens
Biosample type
209
tissue
159
primary cell
36
cell line
8
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
369
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
320
hg19
98
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
412 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
26
15
1
14
1
2
1
islet of Langerhans
1
6
3
11
13
1
2
2
2
2
body of pancreas
8
5
4
2
1
3
pancreas
5
5
5
3
1
1
1
chorionic villus
8
4
4
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
trophoblast cell
7
5
1
4
1
pancreatic beta cell
3
8
3
3
pancreatic alpha cell
3
7
3
3
pancreatic acinar cell
3
6
3
3
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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