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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
accessible chromatin
53
target gene predictions
49
gene expression
42
candidate regulatory elements
33
differential activity
26
chromatin state
eQTL
13
variant allelic effects
11
binding sites
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
71
September, 2022
47
February, 2021
46
March, 2023
33
May, 2021
25
February, 2023
25
February, 2024
22
November, 2021
22
November, 2022
20
January, 2021
10
June, 2020
9
March, 2020
8
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
3
August, 2017
2
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
1
August, 2021
1
January, 2018
1
June, 2021
Available data
256
bed bed3+
93
bigWig
76
tsv
22
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
370
Homo sapiens
Biosample type
168
tissue
149
primary cell
44
cell line
9
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
326
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
283
hg19
71
GRCh38
annotation_type!
eQTL
BIOSAMPLE
TYPE
370 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
retina
23
3
1
6
3
1
1
1
islet of Langerhans
6
1
11
3
1
2
1
2
2
2
body of pancreas
5
2
8
4
1
3
pancreas
5
5
5
3
1
1
1
pigmented layer of retina
20
+ See 10 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
1
1
2
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
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