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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
accessible chromatin
51
target gene predictions
45
gene expression
40
candidate regulatory elements
27
differential activity
25
chromatin state
16
eQTL
13
variant allelic effects
11
binding sites
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
68
September, 2022
47
February, 2021
40
March, 2023
31
May, 2021
25
February, 2023
24
February, 2024
22
November, 2021
22
November, 2022
18
January, 2021
9
June, 2020
9
March, 2020
8
August, 2021
8
May, 2020
6
August, 2018
6
January, 2020
6
October, 2019
4
February, 2020
4
January, 2022
3
August, 2017
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
Available data
248
bed bed3+
89
bigWig
69
tsv
21
bed bed9
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
366
Homo sapiens
Biosample type
182
tissue
132
primary cell
43
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
324
AMP
22
ENCODE
18
T1D
2
community
Genome assembly (visualization)
283
hg19
74
GRCh38
organ_slims!
connective tissue
BIOSAMPLE
TYPE
366 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
retina
23
3
1
6
3
1
1
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 13 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
1
1
2
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
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