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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
166
accessible chromatin
153
candidate regulatory elements
129
target gene predictions
98
chromatin state
68
gene expression
58
histone modifications
45
eQTL
41
Fine-mapped variants
33
differential activity
30
variant allelic effects
27
binding sites
2
sQTL
2
variant to gene
Date released
251
September, 2022
158
February, 2021
47
March, 2020
47
March, 2023
44
May, 2021
35
January, 2020
31
June, 2020
27
February, 2024
27
May, 2020
25
February, 2023
22
February, 2020
22
January, 2022
22
November, 2021
22
November, 2022
20
January, 2021
9
August, 2017
8
August, 2021
8
October, 2022
7
August, 2018
6
October, 2019
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
Available data
566
bed bed3+
145
tsv
114
bigWig
88
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
851
Homo sapiens
Biosample type
533
tissue
184
primary cell
121
cell line
13
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
808
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
716
hg19
229
GRCh38
BIOSAMPLE
TYPE
852 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
2
29
16
18
1
3
2
1
1
islet of Langerhans
6
1
3
11
1
13
2
1
2
2
2
retina
23
6
3
3
1
1
1
1
1
body of pancreas
8
5
4
2
1
3
1
caudate nucleus
2
5
3
4
1
1
2
3
1
+ See 71 more…
primary cell
pancreatic ductal cell
6
3
3
2
3
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 27 more…
cell line
EndoC_BH1
8
1
8
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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