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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
127
accessible chromatin
56
target gene predictions
gene expression
48
candidate regulatory elements
33
differential activity
30
chromatin state
18
eQTL
15
variant allelic effects
11
binding sites
10
histone modifications
8
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
80
September, 2022
45
February, 2021
38
March, 2023
25
February, 2023
23
February, 2024
22
November, 2021
22
November, 2022
20
January, 2021
15
May, 2021
11
June, 2020
11
May, 2020
10
March, 2020
8
August, 2021
6
January, 2020
6
October, 2019
5
January, 2022
3
August, 2017
3
February, 2020
3
November, 2019
2
October, 2022
1
April, 2019
1
June, 2021
Available data
271
bed bed3+
95
bigWig
42
tsv
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
360
Homo sapiens
Biosample type
193
tissue
125
primary cell
36
cell line
6
in vitro differentiated cells
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
229
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
316
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
315
hg19
88
GRCh38
annotation_type!
gene expression
BIOSAMPLE
TYPE
360 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
retina
23
3
6
3
1
1
1
1
islet of Langerhans
6
1
3
13
1
2
1
2
2
2
tibial nerve
3
3
6
4
2
2
3
body of pancreas
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 11 more…
primary cell
pancreatic ductal cell
6
3
3
1
1
2
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
4
3
1
+ See 16 more…
cell line
EndoC_BH1
8
1
3
1
WERI-Rb-1
1
1
2
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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