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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
accessible chromatin
35
gene expression
33
differential activity
31
target gene predictions
8
variant allelic effects
6
candidate regulatory elements
4
binding sites
4
chromatin state
4
histone modifications
1
eQTL
Date released
41
March, 2023
28
May, 2021
20
January, 2021
20
November, 2021
16
September, 2022
15
February, 2024
12
February, 2021
7
August, 2018
5
October, 2019
3
June, 2020
1
February, 2023
1
January, 2022
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
1
October, 2022
Available data
99
bed bed3+
59
tsv
42
bigWig
14
bigBed narrowPeak
4
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
174
Homo sapiens
Biosample type
tissue
130
primary cell
41
cell line
3
in vitro differentiated cells
Organ
888
epithelium
365
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
132
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
105
hg19
31
GRCh38
organ_slims!
spinal cord
biosample_type!
tissue
BIOSAMPLE
TYPE
174 results
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Clear Filters
accessible chromatin
gene expression
differential activity
target gene predictions
variant allelic effects
candidate regulatory elements
binding sites
chromatin state
histone modifications
eQTL
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
+ See 15 more…
cell line
EndoC_BH1
8
8
3
1
1
NT2-D1 cell
1
1
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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