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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
108
accessible chromatin
93
candidate regulatory elements
89
target gene predictions
86
gene expression
60
chromatin state
51
differential activity
31
binding sites
26
variant allelic effects
24
eQTL
17
histone modifications
14
Fine-mapped variants
3
caQTL
2
sQTL
2
variant to gene
Date released
146
September, 2022
97
February, 2021
51
March, 2023
42
February, 2024
37
May, 2021
35
September, 2023
27
November, 2021
22
January, 2021
22
March, 2020
22
May, 2020
20
January, 2020
14
June, 2020
10
January, 2022
9
August, 2021
8
October, 2019
7
August, 2018
7
February, 2020
5
February, 2023
5
November, 2019
5
October, 2022
4
August, 2017
3
April, 2020
3
March, 2024
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
1
May, 2022
Available data
370
bed bed3+
142
tsv
91
bigWig
54
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
txt
1
bed bed9+
Organism
606
Homo sapiens
Biosample type
312
primary cell
237
tissue
52
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
517
AMP
35
KPMP
27
ENCODE
22
T1D
3
LungMap
2
community
Genome assembly (visualization)
448
hg19
163
GRCh38
BIOSAMPLE
TYPE
606 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
histone modifications
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
6
4
5
2
1
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 52 more…
tissue
islet of Langerhans
6
1
11
3
2
1
13
1
2
2
2
body of pancreas
8
5
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
ovary
1
8
6
1
4
1
+ See 17 more…
cell line
EndoC_BH1
8
1
8
3
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
+ See 7 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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