Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
111
candidate regulatory elements
104
target gene predictions
96
accessible chromatin
75
chromatin state
71
gene expression
33
differential activity
24
eQTL
21
variant allelic effects
14
Fine-mapped variants
13
binding sites
13
histone modifications
2
caQTL
2
sQTL
2
variant to gene
Date released
176
September, 2022
91
February, 2021
47
March, 2023
38
May, 2021
30
February, 2024
30
November, 2021
25
March, 2020
20
January, 2021
17
May, 2020
16
August, 2021
16
January, 2020
13
February, 2020
13
June, 2020
10
January, 2022
8
October, 2019
7
April, 2019
7
August, 2018
5
November, 2019
4
February, 2023
3
August, 2017
2
March, 2024
1
January, 2018
1
June, 2021
May, 2019
1
October, 2022
Available data
369
bed bed3+
107
tsv
79
bigWig
66
bed bed9
14
bigBed narrowPeak
11
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
581
Homo sapiens
Biosample type
366
tissue
161
primary cell
50
cell line
4
in vitro differentiated cells
Organ
949
epithelium
651
kidney
462
brain
460
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
265
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
203
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
74
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
529
AMP
30
ENCODE
20
T1D
2
community
Genome assembly (visualization)
459
hg19
166
GRCh38
month_released!
May, 2019
BIOSAMPLE
TYPE
581 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
binding sites
histone modifications
caQTL
sQTL
variant to gene
tissue
heart
37
20
5
21
3
2
1
1
islet of Langerhans
1
6
3
11
13
1
2
2
1
2
2
heart left ventricle
11
7
3
8
1
1
2
1
body of pancreas
8
5
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
+ See 22 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 25 more…
cell line
EndoC_BH1
1
8
8
3
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
cardiac fibroblast
1
See all biosamples
Download