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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
301
gene expression
267
candidate regulatory elements
254
accessible chromatin
208
target gene predictions
138
chromatin state
100
differential activity
54
variant allelic effects
50
binding sites
36
histone modifications
20
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
389
September, 2022
323
February, 2021
160
September, 2023
129
November, 2021
80
February, 2024
51
March, 2023
43
August, 2021
42
May, 2021
36
June, 2020
32
May, 2020
24
January, 2020
22
January, 2021
17
March, 2020
15
November, 2022
12
February, 2020
12
February, 2023
7
April, 2020
7
August, 2018
7
October, 2022
6
August, 2017
6
October, 2019
5
January, 2022
4
March, 2024
2
April, 2019
2
May, 2022
2
November, 2019
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
Available data
874
bed bed3+
383
tsv
207
bigWig
131
bed bed9
90
txt
15
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1439
Homo sapiens
Biosample type
857
primary cell
462
tissue
93
cell line
27
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1119
AMP
160
KPMP
129
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
1020
hg19
351
GRCh38
BIOSAMPLE
TYPE
1439 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
2
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
+ See 160 more…
tissue
kidney
7
29
10
14
16
1
1
2
1
islet of Langerhans
11
6
1
3
1
2
1
13
2
2
2
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
+ See 34 more…
cell line
EndoC_BH1
8
8
1
3
1
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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