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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
72
gene expression
65
target gene predictions
47
candidate regulatory elements
37
differential activity
34
chromatin state
eQTL
20
histone modifications
18
binding sites
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
90
September, 2022
56
February, 2021
53
February, 2024
50
March, 2023
36
May, 2021
23
November, 2021
20
January, 2021
19
March, 2020
9
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
5
August, 2021
3
November, 2019
2
February, 2020
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
259
bed bed3+
102
tsv
80
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
410
Homo sapiens
Biosample type
189
primary cell
149
tissue
62
cell line
10
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
365
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
294
hg19
114
GRCh38
1
hg18
annotation_type!
eQTL
BIOSAMPLE
TYPE
410 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
3
1
1
4
1
2
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 17 more…
tissue
liver
4
1
10
13
1
9
2
1
1
islet of Langerhans
6
11
1
3
1
2
1
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
+ See 8 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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