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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
accessible chromatin
139
target gene predictions
130
candidate regulatory elements
93
gene expression
79
chromatin state
46
binding sites
41
differential activity
35
histone modifications
34
eQTL
28
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
203
September, 2022
165
February, 2021
74
November, 2021
49
May, 2021
47
March, 2023
42
February, 2024
27
June, 2020
20
January, 2021
19
August, 2021
18
March, 2020
17
September, 2023
16
May, 2020
14
January, 2020
14
October, 2022
11
August, 2017
11
February, 2020
10
January, 2022
8
October, 2019
7
August, 2018
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
February, 2023
2
January, 2018
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
Available data
550
bed bed3+
130
tsv
111
bigWig
67
bed bed9
14
bigBed narrowPeak
7
txt
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
799
Homo sapiens
Biosample type
432
primary cell
209
tissue
101
cell line
56
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
681
AMP
74
ENCODE
20
T1D
15
KPMP
4
ITG
3
LungMap
2
community
Genome assembly (visualization)
647
hg19
200
GRCh38
2
hg18
BIOSAMPLE
TYPE
799 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
1
pancreatic ductal cell
6
3
3
1
3
2
1
pancreatic beta cell
8
3
3
3
1
osteoblast
5
2
2
2
1
3
2
+ See 60 more…
tissue
islet of Langerhans
6
1
11
3
2
1
13
1
2
2
2
adipose tissue
2
8
7
3
6
1
4
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
subcutaneous adipose tissue
2
2
5
1
1
6
1
3
+ See 17 more…
cell line
MCF-7
1
6
9
5
3
2
EndoC_BH1
8
1
8
3
1
GM23248
1
1
2
1
1
1
T47D
2
3
2
Panc1
2
2
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
4
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 10 more…
stem cell
mesenchymal stem cell
1
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