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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
124
target gene predictions
91
chromatin state
72
accessible chromatin
51
gene expression
33
differential activity
19
eQTL
13
histone modifications
12
binding sites
11
Fine-mapped variants
10
variant allelic effects
2
caQTL
2
sQTL
2
variant to gene
Date released
248
September, 2022
123
February, 2021
47
March, 2023
February, 2024
39
May, 2021
29
November, 2021
20
January, 2021
18
March, 2020
11
May, 2020
10
June, 2020
9
August, 2021
9
January, 2020
8
February, 2020
7
August, 2018
7
October, 2019
6
August, 2017
5
January, 2022
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
411
bed bed3+
86
tsv
84
bed bed9
55
bigWig
5
bigBed bed9
5
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
612
Homo sapiens
Biosample type
409
tissue
150
primary cell
51
cell line
2
in vitro differentiated cells
Organ
873
epithelium
651
kidney
465
brain
440
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
561
AMP
29
ENCODE
20
T1D
2
community
Genome assembly (visualization)
517
hg19
148
GRCh38
month_released!
February, 2024
BIOSAMPLE
TYPE
612 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
histone modifications
binding sites
Fine-mapped variants
variant allelic effects
caQTL
sQTL
variant to gene
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
1
3
6
11
12
1
2
2
1
2
2
body of pancreas
8
5
4
2
1
3
1
+ See 22 more…
primary cell
pancreatic ductal cell
3
5
3
3
2
1
pancreatic alpha cell
3
6
3
3
1
pancreatic beta cell
3
7
3
3
pancreatic acinar cell
3
5
3
3
pancreatic delta cell
4
4
3
3
+ See 21 more…
cell line
EndoC_BH1
1
8
8
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
2
1
1
1
+ See 4 more…
in vitro differentiated cells
myotube
1
1
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