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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
329
candidate regulatory elements
261
gene expression
199
target gene predictions
168
chromatin state
142
accessible chromatin
90
differential activity
34
variant allelic effects
26
eQTL
19
binding sites
19
histone modifications
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
473
September, 2022
311
February, 2021
140
September, 2023
47
March, 2023
41
February, 2024
39
May, 2021
37
August, 2021
32
November, 2021
30
May, 2020
25
June, 2020
23
January, 2020
21
March, 2020
20
January, 2021
17
February, 2020
7
August, 2018
7
October, 2019
6
August, 2017
6
January, 2022
5
October, 2022
4
March, 2024
3
May, 2019
3
May, 2022
2
April, 2019
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
749
bed bed3+
341
tsv
161
bed bed9
109
bigWig
87
txt
14
bigBed narrowPeak
7
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1304
Homo sapiens
Biosample type
721
tissue
485
primary cell
92
cell line
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1110
AMP
140
KPMP
32
ENCODE
20
T1D
2
community
Genome assembly (visualization)
940
hg19
262
GRCh38
BIOSAMPLE
TYPE
1304 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
eQTL
binding sites
histone modifications
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
kidney
29
7
14
16
10
1
1
1
2
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
islet of Langerhans
11
1
3
6
1
13
2
1
2
2
2
+ See 49 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
pancreatic ductal cell
3
3
6
3
1
1
2
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 89 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
2
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
ACHN
2
1
1
1
+ See 16 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
1
renal cell carcinoma
1
See all biosamples
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