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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
59
target gene predictions
51
candidate regulatory elements
49
gene expression
33
differential activity
30
chromatin state
16
eQTL
13
binding sites
13
histone modifications
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
83
September, 2022
59
February, 2021
47
March, 2023
35
May, 2021
20
January, 2021
19
February, 2024
18
November, 2021
9
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
210
bed bed3+
77
tsv
53
bigWig
26
bed bed9
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
343
Homo sapiens
Biosample type
128
primary cell
126
tissue
86
cell line
3
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
303
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
250
hg19
75
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
343 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
pancreatic beta cell
8
3
3
3
pancreatic alpha cell
7
3
3
3
pancreatic acinar cell
6
3
3
3
pancreatic delta cell
5
4
3
3
+ See 13 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
2
2
2
body of pancreas
5
8
2
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
prostate gland
1
2
4
2
1
2
2
+ See 8 more…
cell line
EndoC_BH1
8
1
8
3
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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