Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
137
candidate regulatory elements
117
target gene predictions
86
accessible chromatin
76
chromatin state
51
gene expression
differential activity
18
eQTL
14
histone modifications
14
variant allelic effects
11
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
208
September, 2022
102
February, 2021
39
May, 2021
37
November, 2021
31
February, 2024
20
January, 2021
15
March, 2023
14
June, 2020
11
March, 2020
8
August, 2021
7
August, 2017
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
3
March, 2024
2
February, 2020
2
November, 2019
1
April, 2019
1
January, 2018
1
June, 2021
1
October, 2022
Available data
387
bed bed3+
68
bed bed9
68
bigWig
48
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
533
Homo sapiens
Biosample type
346
tissue
119
primary cell
65
cell line
3
in vitro differentiated cells
Organ
857
epithelium
596
kidney
466
brain
446
connective tissue
374
musculature of body
311
lung
289
intestine
255
heart
248
vasculature
244
limb
244
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
192
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
476
AMP
37
ENCODE
20
T1D
Genome assembly (visualization)
469
hg19
140
GRCh38
annotation_type!
differential activity
BIOSAMPLE
TYPE
533 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
eQTL
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
13
1
1
2
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 26 more…
primary cell
pancreatic ductal cell
3
6
3
2
1
1
pancreatic beta cell
3
8
3
1
pancreatic alpha cell
3
7
3
1
pancreatic acinar cell
3
6
3
1
pancreatic delta cell
4
5
3
1
+ See 18 more…
cell line
EndoC_BH1
1
8
8
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download