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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
130
candidate regulatory elements
111
target gene predictions
78
accessible chromatin
73
chromatin state
50
gene expression
33
differential activity
18
eQTL
11
binding sites
11
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
199
September, 2022
95
February, 2021
47
March, 2023
39
May, 2021
28
February, 2024
28
November, 2021
20
January, 2021
12
June, 2020
11
March, 2020
8
August, 2021
7
August, 2017
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
360
bed bed3+
78
tsv
65
bed bed9
62
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
535
Homo sapiens
Biosample type
328
tissue
136
primary cell
68
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
485
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
439
hg19
128
GRCh38
BIOSAMPLE
TYPE
535 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
13
2
1
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 21 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 15 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
Panc1
2
2
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
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