Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
192
candidate regulatory elements
145
target gene predictions
108
chromatin state
83
accessible chromatin
49
gene expression
33
differential activity
17
eQTL
14
binding sites
12
variant allelic effects
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
311
September, 2022
119
February, 2021
47
March, 2023
38
May, 2021
31
November, 2021
26
February, 2024
20
January, 2021
11
June, 2020
11
March, 2020
8
August, 2021
7
August, 2018
6
January, 2022
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
October, 2022
3
April, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
462
bed bed3+
102
bed bed9
77
tsv
68
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
672
Homo sapiens
Biosample type
375
tissue
164
primary cell
130
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
616
AMP
31
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
578
hg19
165
GRCh38
BIOSAMPLE
TYPE
672 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
lung
33
17
16
1
1
small intestine
29
17
15
1
1
left lung
26
13
13
right lung
22
11
11
1
islet of Langerhans
1
3
6
11
13
2
1
1
2
2
2
+ See 13 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
fibroblast of lung
6
4
4
2
pancreatic acinar cell
3
6
3
3
1
+ See 20 more…
cell line
A549
21
19
18
1
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download