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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
60
accessible chromatin
50
target gene predictions
49
gene expression
40
candidate regulatory elements
33
differential activity
25
chromatin state
17
eQTL
8
Fine-mapped variants
7
binding sites
7
variant allelic effects
6
histone modifications
2
sQTL
2
variant to gene
Date released
67
September, 2022
47
March, 2023
37
February, 2021
34
May, 2021
20
January, 2021
18
November, 2021
16
February, 2024
12
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2020
5
January, 2022
3
August, 2017
3
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
October, 2022
Available data
188
bed bed3+
81
tsv
57
bigWig
21
bed bed9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
306
Homo sapiens
Biosample type
150
tissue
116
primary cell
37
cell line
3
in vitro differentiated cells
Organ
935
epithelium
652
kidney
466
brain
457
connective tissue
375
musculature of body
311
lung
289
intestine
266
vasculature
263
pancreas
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
266
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
213
hg19
74
GRCh38
files.file_type!
bigBed narrowPeak
BIOSAMPLE
TYPE
306 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
Fine-mapped variants
binding sites
variant allelic effects
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
2
2
1
1
2
2
spinal cord
1
8
14
7
1
body of pancreas
5
2
8
4
1
3
1
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 8 more…
primary cell
pancreatic ductal cell
5
3
3
3
1
1
2
pancreatic acinar cell
5
3
3
3
1
pancreatic beta cell
7
2
3
3
pancreatic alpha cell
6
2
3
3
pancreatic delta cell
4
3
3
3
+ See 13 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
spinal cord
1
2
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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