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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
accessible chromatin
49
gene expression
48
target gene predictions
33
candidate regulatory elements
33
differential activity
21
chromatin state
17
eQTL
11
variant allelic effects
8
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
56
September, 2022
47
March, 2023
39
February, 2021
33
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
January, 2022
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
172
bed bed3+
77
tsv
57
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
297
Homo sapiens
Biosample type
128
tissue
126
primary cell
40
cell line
3
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
438
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
257
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
203
hg19
67
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
297 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
5
11
1
3
13
1
2
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
3
5
5
3
1
1
1
1
testis
1
3
7
3
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
5
3
3
3
1
1
2
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
NT2-D1 cell
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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