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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
44
target gene predictions
37
candidate regulatory elements
33
differential activity
31
gene expression
23
chromatin state
17
eQTL
12
variant allelic effects
10
binding sites
8
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
62
September, 2022
47
March, 2023
44
February, 2021
May, 2021
26
February, 2024
20
January, 2021
20
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
7
June, 2020
6
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
177
bed bed3+
61
tsv
59
bigWig
19
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
286
Homo sapiens
Biosample type
131
primary cell
127
tissue
25
cell line
3
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
243
AMP
20
ENCODE
20
T1D
2
community
1
LungMap
Genome assembly (visualization)
210
hg19
71
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
286 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
gene expression
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
2
1
pancreatic ductal cell
6
2
3
2
1
1
2
pancreatic alpha cell
7
3
3
2
1
pancreatic delta cell
5
4
3
2
1
pancreatic acinar cell
6
2
3
2
1
+ See 14 more…
tissue
islet of Langerhans
5
1
9
3
13
1
2
1
2
2
2
body of pancreas
4
8
2
4
1
1
3
pancreas
5
4
5
3
1
1
1
1
testis
1
3
7
1
3
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
cell line
EndoC_BH1
1
1
3
1
NT2-D1 cell
1
1
1
1
2
Panc1
1
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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