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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
58
target gene predictions
44
candidate regulatory elements
39
gene expression
28
chromatin state
14
eQTL
11
variant allelic effects
7
histone modifications
6
binding sites
3
Fine-mapped variants
1
differential activity
1
sQTL
Date released
77
September, 2022
March, 2023
42
February, 2021
34
May, 2021
25
February, 2024
20
January, 2021
19
November, 2021
10
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
October, 2019
5
June, 2020
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
197
bed bed3+
58
bigWig
35
tsv
24
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
279
Homo sapiens
Biosample type
156
tissue
88
primary cell
32
cell line
3
in vitro differentiated cells
Organ
911
epithelium
652
kidney
466
brain
451
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
240
AMP
20
T1D
19
ENCODE
Genome assembly (visualization)
235
hg19
73
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
279 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
differential activity
sQTL
tissue
thymus
1
14
20
11
1
1
islet of Langerhans
6
1
11
3
12
1
1
2
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 7 more…
primary cell
pancreatic ductal cell
6
3
2
1
2
1
pancreatic beta cell
8
3
2
1
pancreatic alpha cell
7
3
2
1
pancreatic acinar cell
6
3
2
1
pancreatic delta cell
5
4
2
1
+ See 9 more…
cell line
EndoC_BH1
8
1
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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