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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
accessible chromatin
59
target gene predictions
50
candidate regulatory elements
50
gene expression
33
differential activity
30
chromatin state
17
eQTL
14
variant allelic effects
11
binding sites
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
83
September, 2022
52
February, 2021
47
March, 2023
34
May, 2021
27
February, 2024
25
February, 2023
24
November, 2021
22
November, 2022
20
January, 2021
11
June, 2020
9
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
5
January, 2022
4
February, 2020
3
August, 2017
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
Available data
274
bed bed3+
94
bigWig
79
tsv
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
409
Homo sapiens
Biosample type
204
tissue
152
primary cell
44
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
363
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
314
hg19
84
GRCh38
BIOSAMPLE
TYPE
409 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
retina
23
3
6
1
3
1
1
1
1
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
+ See 12 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 19 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
1
1
2
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
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