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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
accessible chromatin
81
gene expression
75
target gene predictions
74
candidate regulatory elements
51
differential activity
50
chromatin state
26
variant allelic effects
25
binding sites
21
eQTL
14
Fine-mapped variants
14
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
119
September, 2022
79
February, 2021
51
March, 2023
39
February, 2024
36
May, 2021
35
September, 2023
24
November, 2021
21
March, 2020
21
May, 2020
20
January, 2020
20
January, 2021
9
August, 2021
9
June, 2020
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
4
October, 2022
3
April, 2020
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
320
bed bed3+
137
tsv
88
bigWig
45
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
txt
Organism
538
Homo sapiens
Biosample type
295
primary cell
198
tissue
45
cell line
in vitro differentiated cells
Organ
923
epithelium
651
kidney
462
brain
408
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
454
AMP
35
KPMP
24
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
388
hg19
148
GRCh38
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
538 results
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accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
eQTL
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
4
6
5
1
2
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 44 more…
tissue
islet of Langerhans
6
11
1
3
1
2
13
2
1
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
3
1
tibial artery
3
1
2
3
3
2
2
3
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 5 more…
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