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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
214
accessible chromatin
160
gene expression
129
target gene predictions
117
candidate regulatory elements
59
chromatin state
49
binding sites
41
variant allelic effects
32
histone modifications
30
differential activity
3
eQTL
2
caQTL
Date released
215
February, 2021
169
September, 2022
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
October, 2022
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
583
bed bed3+
176
bigWig
169
tsv
78
txt
56
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
836
Homo sapiens
Biosample type
686
primary cell
63
tissue
58
cell line
29
in vitro differentiated cells
Organ
794
epithelium
512
kidney
463
brain
441
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
255
heart
244
limb
231
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
184
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
680
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
642
hg19
240
GRCh38
month_released!
September, 2023
BIOSAMPLE
TYPE
836 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
differential activity
eQTL
caQTL
primary cell
endothelial cell
15
9
7
2
2
1
1
2
hepatocyte
8
13
3
1
1
1
2
4
epithelial cell of proximal tubule
1
16
1
2
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 117 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 16 more…
cell line
EndoC_BH1
8
8
1
1
3
EH
1
2
1
EL
1
2
1
ELR
1
2
1
keratinocyte
3
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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