Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
183
candidate regulatory elements
149
target gene predictions
88
chromatin state
33
accessible chromatin
18
binding sites
14
histone modifications
13
gene expression
8
eQTL
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
246
September, 2022
130
February, 2021
66
February, 2024
13
November, 2021
11
June, 2020
9
March, 2020
9
May, 2021
6
February, 2020
6
October, 2022
5
January, 2020
5
May, 2020
4
March, 2024
3
August, 2017
3
May, 2022
2
January, 2022
2
May, 2019
1
August, 2021
1
October, 2019
Available data
411
bed bed3+
85
bed bed9
17
bigWig
16
tsv
3
bigBed bed9
Organism
522
Homo sapiens
Biosample type
321
tissue
97
cell line
96
primary cell
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
509
AMP
13
ENCODE
Genome assembly (visualization)
511
hg19
164
GRCh38
BIOSAMPLE
TYPE
522 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 23 more…
cell line
HeLa-S3
5
55
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
EH
2
1
1
+ See 4 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
1
4
2
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
+ See 9 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
myotube
1
1
See all biosamples
Download