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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
38
accessible chromatin
37
candidate regulatory elements
33
gene expression
32
target gene predictions
27
chromatin state
21
binding sites
20
histone modifications
13
eQTL
9
Fine-mapped variants
9
variant allelic effects
6
differential activity
3
caQTL
Date released
73
September, 2022
46
February, 2021
30
February, 2024
16
March, 2020
10
August, 2021
9
June, 2020
8
May, 2020
7
February, 2020
7
January, 2020
7
November, 2021
5
May, 2021
5
September, 2023
4
January, 2022
4
March, 2023
3
August, 2017
3
February, 2023
3
November, 2019
2
May, 2022
2
October, 2022
1
April, 2020
1
July, 2020
1
May, 2019
1
September, 2018
Available data
161
bed bed3+
44
tsv
34
bigWig
24
bed bed9
3
bigBed bed9
3
csv
1
bam
Organism
248
Homo sapiens
Biosample type
109
primary cell
100
tissue
32
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
235
AMP
7
ENCODE
5
KPMP
1
LungMap
Genome assembly (visualization)
200
hg19
92
GRCh38
2
hg18
BIOSAMPLE
TYPE
248 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
primary cell
hepatocyte
8
1
13
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
bronchial epithelial cell
1
4
2
2
2
1
hepatic stellate cell
3
1
1
1
1
1
1
fibroblast of pulmonary artery
1
2
1
1
2
1
+ See 10 more…
tissue
liver
4
13
1
10
9
1
2
7
1
1
coronary artery
3
3
1
3
3
2
3
2
1
tibial artery
3
3
1
2
3
2
3
2
right lobe of liver
2
1
1
1
1
3
abdominal aorta artery
1
+ See 1 more…
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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