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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
134
accessible chromatin
100
candidate regulatory elements
92
differential activity
83
target gene predictions
53
chromatin state
43
binding sites
41
variant allelic effects
29
histone modifications
4
eQTL
2
caQTL
Date released
197
February, 2021
155
September, 2023
151
September, 2022
November, 2021
76
February, 2024
44
May, 2021
38
March, 2023
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
431
bed bed3+
322
tsv
98
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
832
Homo sapiens
Biosample type
692
primary cell
61
tissue
53
cell line
26
in vitro differentiated cells
Organ
820
epithelium
647
kidney
465
brain
410
connective tissue
362
musculature of body
301
lung
267
intestine
259
pancreas
259
vasculature
245
heart
243
limb
217
bodily fluid
213
embryo
206
blood
200
blood vessel
192
skin of body
166
large intestine
151
liver
143
extraembryonic component
108
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
80
small intestine
79
uterus
77
prostate gland
75
artery
71
placenta
64
penis
64
ureter
62
adrenal gland
62
lymph node
48
thymus
46
gonad
43
spinal cord
39
esophagus
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
18
lymphatic vessel
18
mouth
18
skeleton
14
bronchus
12
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
648
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
484
hg19
108
GRCh38
month_released!
November, 2021
March, 2024
BIOSAMPLE
TYPE
832 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
7
1
2
1
1
2
4
endothelial cell
9
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 122 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 14 more…
cell line
EndoC_BH1
8
8
3
1
1
pituitary stalk
10
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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