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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
244
gene expression
220
candidate regulatory elements
217
accessible chromatin
198
target gene predictions
113
chromatin state
80
differential activity
44
variant allelic effects
33
binding sites
31
histone modifications
11
eQTL
6
Fine-mapped variants
4
caQTL
Date released
319
September, 2022
261
February, 2021
132
November, 2021
130
September, 2023
77
February, 2024
49
May, 2021
34
March, 2023
27
June, 2020
24
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
February, 2020
14
January, 2020
14
March, 2020
12
February, 2023
7
October, 2022
6
August, 2018
6
October, 2019
5
August, 2017
5
March, 2024
5
May, 2022
4
April, 2020
2
January, 2022
2
May, 2019
1
July, 2020
1
November, 2019
Available data
752
bed bed3+
306
tsv
174
bigWig
108
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1201
Homo sapiens
Biosample type
742
primary cell
370
tissue
63
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
913
AMP
132
ENCODE
130
KPMP
20
T1D
4
LungMap
2
community
Genome assembly (visualization)
878
hg19
293
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
1201 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
2
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 133 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 40 more…
cell line
EndoC_BH1
8
8
1
3
1
pituitary stalk
10
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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