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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
226
accessible chromatin
194
target gene predictions
160
candidate regulatory elements
94
binding sites
92
differential activity
84
chromatin state
57
histone modifications
41
variant allelic effects
6
eQTL
2
caQTL
Date released
286
February, 2021
238
September, 2022
155
September, 2023
127
November, 2021
104
February, 2024
49
May, 2021
39
June, 2020
38
March, 2023
27
October, 2022
25
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
4
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
775
bed bed3+
326
tsv
176
bigWig
79
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1211
Homo sapiens
Biosample type
850
primary cell
263
cell line
69
tissue
29
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
900
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
859
hg19
292
GRCh38
BIOSAMPLE
TYPE
1211 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
binding sites
differential activity
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
2
5
1
+ See 150 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
pituitary stalk
10
GM06990
1
1
2
2
1
1
+ See 39 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
kidney epithelium
1
1
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
hepatocyte(AFP)
3
+ See 5 more…
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