Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
candidate regulatory elements
57
target gene predictions
43
chromatin state
12
accessible chromatin
11
histone modifications
10
binding sites
2
eQTL
1
gene expression
Date released
129
September, 2022
62
February, 2021
14
May, 2021
9
June, 2020
3
November, 2021
3
October, 2022
2
January, 2022
1
March, 2024
Available data
177
bed bed3+
43
bed bed9
3
bigWig
1
tsv
Organism
223
Homo sapiens
Biosample type
103
tissue
81
primary cell
28
cell line
11
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
220
AMP
3
ENCODE
Genome assembly (visualization)
220
hg19
48
GRCh38
BIOSAMPLE
TYPE
223 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
tissue
placenta
26
15
14
1
2
1
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
umbilical cord
2
1
1
1
1
amnion
2
1
1
+ See 4 more…
primary cell
foreskin keratinocyte
11
4
4
trophoblast cell
7
5
4
1
1
foreskin fibroblast
6
2
1
1
2
4
fibroblast of villous mesenchyme
2
1
1
1
1
2
foreskin melanocyte
4
1
1
+ See 8 more…
cell line
pituitary stalk
10
EH
2
1
1
EL
2
1
1
ELR
2
1
1
HTR-8/Svneo
1
1
1
+ See 1 more…
in vitro differentiated cells
trophoblast cell
2
2
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
See all biosamples
Download