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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
29
target gene predictions
28
candidate regulatory elements
15
chromatin state
12
binding sites
7
accessible chromatin
6
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
42
September, 2022
29
February, 2021
12
May, 2021
6
November, 2021
4
June, 2020
3
October, 2022
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2024
Available data
84
bed bed3+
14
bed bed9
3
bigWig
1
tsv
Organism
100
Homo sapiens
Biosample type
46
cell line
46
primary cell
5
tissue
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
465
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
94
AMP
6
ENCODE
Genome assembly (visualization)
98
hg19
21
GRCh38
BIOSAMPLE
TYPE
100 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
cell line
MCF-7
6
9
5
3
1
2
pituitary stalk
10
T47D
2
3
2
MCF 10A
3
primary cell
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
4
1
fibroblast of mammary gland
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
luminal epithelial cell of mammary gland
3
1
1
2
tissue
mammary gland
1
1
pituitary gland
1
1
pituitary
1
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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