Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
75
target gene predictions
73
gene expression
candidate regulatory elements
37
differential activity
34
chromatin state
24
eQTL
21
histone modifications
18
binding sites
15
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
63
September, 2022
54
February, 2024
51
March, 2023
46
May, 2021
38
February, 2021
23
November, 2021
20
January, 2021
19
March, 2020
18
August, 2021
9
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
January, 2022
6
October, 2019
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
March, 2024
1
October, 2022
1
September, 2018
Available data
224
bed bed3+
105
tsv
80
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
399
Homo sapiens
Biosample type
187
primary cell
140
tissue
64
cell line
8
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
354
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
274
hg19
122
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
399 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
chromatin state
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
3
13
1
4
1
2
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 17 more…
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
liver
4
10
1
1
9
7
2
1
1
pancreas
5
5
3
1
1
1
1
body of pancreas
5
2
4
1
1
3
endocrine pancreas
4
4
+ See 10 more…
cell line
EndoC_BH1
8
1
8
3
1
HepG2
2
3
2
5
3
pituitary stalk
10
HuH-7
1
1
1
1
1
Panc1
2
1
+ See 6 more…
in vitro differentiated cells
hepatocyte(AFP)
3
pancreatic ductal cell
3
hepatocyte
1
1
See all biosamples
Download